CDS

Accession Number TCMCG016C26482
gbkey CDS
Protein Id OMO54136.1
Location complement(join(12131..12206,12372..12440,12527..12684,12775..12906,13011..13336,13458..13552,13750..13811,13917..13949))
Organism Corchorus capsularis
locus_tag CCACVL1_28026

Protein

Length 316aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015030.1
Definition hypothetical protein CCACVL1_28026 [Corchorus capsularis]
Locus_tag CCACVL1_28026

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17302        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTGGGCAGGCTCAATCAATCAAATTTGAGAAAGAATTCATTCAAACTTCTGAGAGAGTGAAGTCAGTGGAGCTTCATCCAACAAAACCATGGGTTTTAGCTGCATTGCATTCAGGAAATGTCTGTATTTGGAACTACCACTTGCAGAAAATAGAGAAATCTTTCAAGGTCATTGAATCAGTACCAGTAAGGTCAGCAAAGTTCATAGTGCAAGAAAACTTGATTGTTGTTGGAGCTGATGATGGATTTATTCGCGTATACAACTCCGATACGCTGGAAATAATCAAGGAAATCCAGGCACATACAGATTTCATTAGGAATCTGGCTGTTCATCCAACTCTTCCCTATGTCTTGTCATCCTCAGATGATAAGCTCATAAAGCTTTGGGACTGGGAAAAGGGTTGGATTTGCAGTAAGGTCTTTGAGGGACATGAACATTATGTAATGCAAGTTGCATTCAATCCTAAAGACCTTAACACTTTTGCAAGTGCATCACTTGATGGCACCATAAAGATTTGGAATATGGATTCTGATTCTCCAAGTTTTACATTGGATGCACACTCGAAAGGGATCAACTGCGTTGAGTACTTGCTGGCCGGTGATAAATTATTTTTGATCAGTGGTTCAGATGATTATACTGCTAAGGTCTGGGACTGGGACTATGAAACCAAAAGTTGTGTCCAAATTCTAGAAGGCCATACAAACAATGTTACAGCAATATGTGTTCTGCAGCCAGAGCTTCCCAACATAATTACTTGTTCTGAGGATGGAACTGTTCGGATATGGGACCGAACAAATTACAGGCTTGAGAACACATTGGAATATGGTCTTGAAAGAGTCTGGACTGTTGCTTACATGAAAGGTTCTAACAAAGCCGTGTTTGGATGCGATAAAGGGATGATCATGGTCAAAATTAGCCGTTCTCATGGCTCGGATTCTACCATTTAA
Protein:  
MIGQAQSIKFEKEFIQTSERVKSVELHPTKPWVLAALHSGNVCIWNYHLQKIEKSFKVIESVPVRSAKFIVQENLIVVGADDGFIRVYNSDTLEIIKEIQAHTDFIRNLAVHPTLPYVLSSSDDKLIKLWDWEKGWICSKVFEGHEHYVMQVAFNPKDLNTFASASLDGTIKIWNMDSDSPSFTLDAHSKGINCVEYLLAGDKLFLISGSDDYTAKVWDWDYETKSCVQILEGHTNNVTAICVLQPELPNIITCSEDGTVRIWDRTNYRLENTLEYGLERVWTVAYMKGSNKAVFGCDKGMIMVKISRSHGSDSTI